Heatmap 1

Comparing Stator states vs. the annotations from the first column in meta data table.
For liver cancer dataset: Stator states vs. Cell types (by clustering + singleR).

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Heatmap 2

Comparing Stator states vs. the annotations from the second column in meta data table.
For liver cancer dataset: Stator states vs. Cell states (by NMF).

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Heatmap 3

Comparing the annotations between the first and second column in meta data table.
For liver cancer dataset: Cell states vs. Cell types.

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Heatmap 4

Comparing between Stator states.

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Heatmap 1

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Heatmap 2

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Heatmap 3

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Heatmap 4

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Heatmap: Gene set

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Heatmap: State genes

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Functional enrichment

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Functional enrichment table

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Word cloud

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Treemap plot

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Scatter plot

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Reduced Terms

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Upset Plot

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DE analysis for two states

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DEGs result table

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GO & KEGG for DEGs

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GO & KEGG for DEGs table

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Find markers for a cell state

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Markers result table

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GO & KEGG for Markers

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GO & KEGG for Marker table

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Find markers for all cell states

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Automatic Annotation

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Automatic Annotation Heatmap

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Markov blanket

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Full dendrogram

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Sub dendrogram

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2D plot

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